trsdate - Set instrument and date directories
trsgroup - Make list files of identical observations and master lists
trslist - Make a Starbase file of usefull TRES keywords for night's files
tlog - List night's observed files including human-readable times
btres - Process TRES bias and dark images removing cosmic rays
ctres - Process TRES object images to spectra removing cosmic rays
dtres - Process TRES dark images, removing cosmic rays
ftres - Process TRES flat field spectra for extraction and flattening
otres - Process TRES object images to spectra
qtres - Quick look for TRES spectrum from raw image to 1-D orders
stres - Process TRES sky images to spectra for aperture extraction
ttres - Process TRES ThAr spectra to spectra removing cosmic rays
tquick - Set instrument and date directories for current date quick look
tdata - Go to current raw data directory
txds9 - Display raw TRES FITS images from list or sequence no.
tsds9 - Display processed TRES FITS images from list or sequence no.
txhead - Display raw TRES FITS headers from list or sequence no.
txstat - Compute image statistics on both extensions of TRES FITS files
tmonth - List dates in specified month with TRES data
tharplot - Plot thorium argon calibration spectra with lines labelled
trspec - List all spectra of given object and/or apfib and/or program
trsplot - Plot TRES spectra using emsao with no lines labelled
tsdelete - Delete files from range of sequence numbers
tsubsky - Subtract sky spectra from object+sky spectra
skyplot - Plot spectrum with night sky lines labelled
tcemsao - Find and fit emission lines in a list of ThAr spectra
tpxcsao - Cross-correlate ThAr spectra against a reference (pixels)
tvxcsao - Cross-correlate ThAr spectra against a reference (velocity)
twxcsao - Cross-correlate ThAr spectra against a reference (wavelength)
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tampfix - Fix preamp problem using SPP version of Brian McLeod's C code
tapref - Find an aperture reference file for a TRES spectrum
tarith - Perform operation on two spectra with non-linear dispersions
tblaze - Remove blaze function from a list of spectra
tblaze1 - Remove blaze function from a spectrum
tcal - Find shifts and dispersion correct list of calibration spectra
tcal1 - Find shift and dispersion correct one calibration spectrum
tharset - Set local ThAr standard for shifts on one night
tharadd - Add ThAr shift from standard to table of shifts on one night
thartable - Tabulate MJD, reference, and shift for ThAr spectra
tharshift1 - Compute pixel shift for a spectrum using night's ThAr spectra
tmakeref - Set flat field aperture and flattening files for one night
tmakeblaze - Make normalized blaze function spectrum from flat spectrum
tmakeflat - Make a TRES aperture-sensitive image flat file using apflatten
tmakemask - Make mask of non-spectrum parts of TRES image from flattening image
tmakenorm - Make a TRES aperture-sensitive image norm file using apnormalize
tcosmic - Remove cosmic rays from multiple observations of one pointing
tcosbad - Make bad pixel image with pixels which are probably cosmic rays
tcosfix - Replace cosmic rays with scaled median or scaled comparison
tcoslim - Compute limiting counts for non-cosmic ray pixels
tcosmed - Compute median image for cosmic ray search
trsdump - Dump all TRES pipeline task parameters to a file
tskysub - Scale and subtract sky spectrum from object+sky spectrum
tdate - Run trsdate for date of current working directory
tdisp1 - Add dispersion function to a TRES spectrum
textract - Extract multi-order spectra from images to IRAF echelle files
tflat - Correct TRES images using flattening files from TMAKEFLAT
tflat1 - Correct TRES image using flattening files from TMAKEFLAT
tgain1 - Correct TRES image gains
tidref - Find an appropriate comparison lamp spectrum for TRES spectrum
tdispref - Find a comparison lamp spectrum w/dispersion for TRES spectrum
tmodid - Copy ID database file, changing filename and line positions
tpmake - Make a relative throughput correction spectrum
tpreamp - Fix preamp problem on list of files
tpreamp1 - Fix preamp problem on a single image
tpreproc - Process images up to amplifier integration into single image
tproc - Process images up to cosmic ray removal
tproc1 - Run mscred.ccdproc on a single image
trsdb - Make a Starbase tab-separated table of relevant data info
tscat - Remove scattered light from a list of TRES images
tscat1 - Remove scattered light from a TRES image
tfib - Summarize TRES observing parameters for a list of files
tfib1 - Summarize TRES observing parameters for one file
trsfiles - Parse input range of sequence number or list of files
trsavg - Use mscred.combine to average a list of images
trsmed - Use mscred.combine to make a median image
trssum - Use mscred.combine to add images together
twoid - Make new ID database file interpolating two existing files
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cround - Round a floating point number as a string to a string format
filename - Return just the file name from a full pathname
fileroot - Drop any file extensions from a filename or pathname
filepath - Return file pathname given a template
fillimage - Interpolate along lines to fill zeroed pixels
fixdir - Add a trailing / to a directory name is it is not there
gettime - Get current local time for logging in file header
imgetp - Return parameter value from header and default if not there
isnum - Return 1 if integer, 2 if floating point, else zero
isrange - Return 1 if string is a range of numbers i-j or i1,i2,i3
makepath - Make a path name from a file name and directory path
padstr - Replace blanks in a string with _ and : n with :0n
relearn - Update parameter file: add new parameters, use current values
round - Round a floating point number to an arbitrary string format
smatch - Find one string in another
tcount - Return number of lines in a file
tdir - List content of current raw data directory
trshistogram - Plot or list a histogram of an image
trelearn - Update package parameter files: current values + new parameters
twc - Find number of lines in list of files
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